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Octopus
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Data Types | |
| type | restart_basic_data_t |
| restart_basic_data_t stores global information about a specific component we want to save. This includes the tag, and the specific sub folder. These information are the same for all restart objects. More... | |
| type | restart_basic_t |
| restart_basic_t stores the basic information about a restart object. More... | |
| interface | restart_block_signals |
| block signals while writing the restart files More... | |
| type | restart_data_t |
| type | restart_t |
| interface | restart_unblock_signals |
| unblock signals when writing restart is finished More... | |
Functions/Subroutines | |
| logical function, public | clean_stop (comm) |
| returns true if a file named stop exists More... | |
| subroutine | restart_basic_init (restart, namespace, data_type, type, ierr, dir) |
| logical function | restart_basic_do_i_write (restart) |
| subroutine | restart_init (restart, namespace, data_type, type, mc, ierr, mesh, dir, exact) |
| Initializes a specific restart object. More... | |
| subroutine | restart_basic_end (restart) |
| subroutine | restart_end (restart) |
| character(len=max_path_len) function | restart_basic_dir (restart) |
| Returns the name of the directory containing the restart information. The use of this function should be avoided, as the access to the restart data should always be done through this module, and it is only provided to allow some older parts of the code to keep functioning until someone fixes them. More... | |
| subroutine | restart_basic_open_dir (restart, dirname, ierr) |
| Change the restart directory to dirname, where "dirname" is a subdirectory of the base restart directory. More... | |
| subroutine | restart_basic_close_dir (restart) |
| Change back to the base directory. To be called after restart_basic_open_dir. More... | |
| subroutine | restart_basic_mkdir (restart, dirname) |
| Make directory "dirname" inside the current restart directory. More... | |
| subroutine | restart_basic_rm (restart, name) |
| Remove directory or file "name" that is located inside the current restart directory. More... | |
| integer function | restart_basic_open (restart, filename, status, position, silent) |
| Open file "filename" found inside the current restart directory. Depending on the type of restart, the file will be used for reading (RESTART_TYPE_LOAD), or for writing (RESTART_TYPE_DUMP). Note that this function only be used to open formatted files and that unformatted data should be accessed using the restart_*_binary subroutines. More... | |
| subroutine | restart_basic_write (restart, iunit, lines, nlines, ierr) |
| subroutine | restart_basic_read (restart, iunit, lines, nlines, ierr) |
| subroutine | restart_basic_close (restart, iunit) |
| Close a file previously opened with restart_basic_open. More... | |
| logical pure function | restart_basic_skip (restart) |
| Returns true if the restart information should neither be read nor written. This might happen because the user chose not to write any restart information, or because the restart information is not available for reading. More... | |
| logical pure function | restart_basic_has_flag (restart, flag) |
| Returns true if... More... | |
| logical pure function | restart_has_map (restart) |
| Returns true if the restart was from a different order of mesh points. More... | |
| integer pure function | restart_basic_get_data_type (restart) |
| Returns the data type of the restart. More... | |
| character(:) function, allocatable | restart_basic_get_info (restart) |
| character(:) function, allocatable | restart_get_info (restart) |
| subroutine | drestart_write_mesh_function (restart, filename, mesh, ff, ierr, root) |
| subroutine | drestart_read_mesh_function (restart, filename, mesh, ff, ierr) |
| In domain parallel case each process reads a part of the file. At the end all the processes have the corresponding mesh part. More... | |
| subroutine | drestart_write_binary1 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary2 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary3 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary5 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_read_binary1 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary2 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary3 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary5 (restart, filename, np, ff, ierr) |
| subroutine | drestart_write_binary1_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary2_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary3_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_write_binary5_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | drestart_read_binary1_int32 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary2_int32 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary3_int32 (restart, filename, np, ff, ierr) |
| subroutine | drestart_read_binary5_int32 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_write_mesh_function (restart, filename, mesh, ff, ierr, root) |
| subroutine | zrestart_read_mesh_function (restart, filename, mesh, ff, ierr) |
| In domain parallel case each process reads a part of the file. At the end all the processes have the corresponding mesh part. More... | |
| subroutine | zrestart_write_binary1 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary2 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary3 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary5 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_read_binary1 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary2 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary3 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary5 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_write_binary1_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary2_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary3_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_write_binary5_int32 (restart, filename, np, ff, ierr, root) |
| subroutine | zrestart_read_binary1_int32 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary2_int32 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary3_int32 (restart, filename, np, ff, ierr) |
| subroutine | zrestart_read_binary5_int32 (restart, filename, np, ff, ierr) |
Variables | |
| integer, parameter | restart_n_data_types = 15 |
| The data_types refer mainly to the run-mode of the calculation. More... | |
| integer, parameter, public | restart_undefined = -1 |
| integer, parameter, public | restart_all = 0 |
| integer, parameter, public | restart_gs = 1 |
| integer, parameter, public | restart_unocc = 2 |
| integer, parameter, public | restart_td = 3 |
| integer, parameter, public | restart_em_resp = 4 |
| integer, parameter, public | restart_em_resp_fd = 5 |
| integer, parameter, public | restart_kdotp = 6 |
| integer, parameter, public | restart_vib_modes = 7 |
| integer, parameter, public | restart_vdw = 8 |
| integer, parameter, public | restart_casida = 9 |
| integer, parameter, public | restart_oct = 10 |
| integer, parameter, public | restart_partition = 11 |
| integer, parameter, public | restart_proj = 12 |
| integer, parameter, public | restart_iteration = 13 |
| integer, parameter, public | restart_custom = 14 |
| integer, parameter, public | restart_dm = 15 |
| integer, parameter, public | restart_type_dump = 1 |
| integer, parameter, public | restart_type_load = 2 |
| integer, parameter, public | restart_flag_states = 1 |
| For each data type, we can write different information into the restart file, which are selected by the restart flags: More... | |
| integer, parameter, public | restart_flag_rho = 2 |
| integer, parameter, public | restart_flag_vhxc = 4 |
| integer, parameter, public | restart_flag_mix = 8 |
| integer, parameter, public | restart_flag_skip = 16 |
| integer, parameter, public | restart_flag_literal = 32 |
| character(len=4), dimension(2), parameter | type_string = (/ "DUMP", "LOAD"/) |
| type(restart_basic_data_t), dimension(restart_undefined:restart_n_data_types), parameter | basic_info = [ restart_basic_data_t("Undefined", ""), restart_basic_data_t("All", ""), restart_basic_data_t("Ground-state", GS_DIR), restart_basic_data_t("Unoccupied states", GS_DIR), restart_basic_data_t("Time-dependent", TD_DIR), restart_basic_data_t("EM Resp.", EM_RESP_DIR), restart_basic_data_t("EM Resp. FD", EM_RESP_FD_DIR), restart_basic_data_t("KdotP", KDOTP_DIR), restart_basic_data_t("Vib. Modes", VIB_MODES_DIR), restart_basic_data_t("VdW", VDW_DIR), restart_basic_data_t("Casida", CASIDA_DIR), restart_basic_data_t("Optimal Control", OCT_DIR), restart_basic_data_t("Mesh Partition", PARTITION_DIR, RESTART_FLAG_SKIP), restart_basic_data_t("GS for TDOutput", GS_DIR), restart_basic_data_t("Iteration counter", ITERATION_DIR), restart_basic_data_t("Custom data", ""), restart_basic_data_t("Adiabatic-state", DM_DIR) ] |
| Information about the components for a given system. More... | |
| logical function, public restart_oct_m::clean_stop | ( | type(mpi_comm), intent(in) | comm | ) |
returns true if a file named stop exists
Definition at line 337 of file restart.F90.
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| [out] | restart | Restart information |
| [in] | data_type | Restart data type (RESTART_GS, RESTART_TD, etc) |
| [in] | type | Is this restart used for dumping (type = RESTART_TYPE_DUMP) or for loading (type = RESTART_TYPE_LOAD)? |
| [out] | ierr | Error code, if any. Required for LOAD, should not be present for DUMP. |
| [in] | dir | Directory where to find the restart data. It is mandatory if data_type=RESTART_UNDEFINED and is ignored in all the other cases. |
Definition at line 369 of file restart.F90.
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Definition at line 695 of file restart.F90.
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Initializes a specific restart object.
A restart object should only be used for one data type at a time. Note that the folder pwd, used to read/write some of the data is stored and can be changed by the functions restart_basic_open_dir() and restart_basic_close_dir().
| [out] | restart | Restart information |
| [in] | data_type | Restart data type (RESTART_GS, RESTART_TD, etc) |
| [in] | type | Is this restart used for dumping (type = RESTART_TYPE_DUMP) or for loading (type = RESTART_TYPE_LOAD)? |
| [in] | mc | The multicommunicator in charge of handling this restart. |
| [out] | ierr | Error code, if any. Required for LOAD, should not be present for DUMP. |
| [in] | mesh | If present, depending on the type of restart, the mesh information is either dumped or the mesh compatibility is checked. |
| [in] | dir | Directory where to find the restart data. It is mandatory if data_type=RESTART_UNDEFINED and is ignored in all the other cases. |
| [in] | exact | If loading the restart information, should the mesh be exactly the same or not? |
Definition at line 709 of file restart.F90.
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Definition at line 881 of file restart.F90.
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Definition at line 895 of file restart.F90.
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Returns the name of the directory containing the restart information. The use of this function should be avoided, as the access to the restart data should always be done through this module, and it is only provided to allow some older parts of the code to keep functioning until someone fixes them.
Definition at line 929 of file restart.F90.
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Change the restart directory to dirname, where "dirname" is a subdirectory of the base restart directory.
Definition at line 944 of file restart.F90.
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Change back to the base directory. To be called after restart_basic_open_dir.
Definition at line 978 of file restart.F90.
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Make directory "dirname" inside the current restart directory.
Definition at line 993 of file restart.F90.
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Remove directory or file "name" that is located inside the current restart directory.
Definition at line 1011 of file restart.F90.
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Open file "filename" found inside the current restart directory. Depending on the type of restart, the file will be used for reading (RESTART_TYPE_LOAD), or for writing (RESTART_TYPE_DUMP). Note that this function only be used to open formatted files and that unformatted data should be accessed using the restart_*_binary subroutines.
Definition at line 1033 of file restart.F90.
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Definition at line 1081 of file restart.F90.
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Definition at line 1108 of file restart.F90.
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Close a file previously opened with restart_basic_open.
Definition at line 1125 of file restart.F90.
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Returns true if the restart information should neither be read nor written. This might happen because the user chose not to write any restart information, or because the restart information is not available for reading.
Definition at line 1144 of file restart.F90.
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Returns true if...
Definition at line 1154 of file restart.F90.
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Returns true if the restart was from a different order of mesh points.
Definition at line 1165 of file restart.F90.
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Returns the data type of the restart.
Definition at line 1174 of file restart.F90.
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Definition at line 1180 of file restart.F90.
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Definition at line 1189 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1267 of file restart.F90.
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In domain parallel case each process reads a part of the file. At the end all the processes have the corresponding mesh part.
Definition at line 1348 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1444 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1486 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1528 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1570 of file restart.F90.
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Definition at line 1612 of file restart.F90.
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Definition at line 1640 of file restart.F90.
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Definition at line 1668 of file restart.F90.
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Definition at line 1695 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1722 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1736 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1750 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1764 of file restart.F90.
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Definition at line 1778 of file restart.F90.
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Definition at line 1792 of file restart.F90.
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Definition at line 1806 of file restart.F90.
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Definition at line 1819 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 1907 of file restart.F90.
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In domain parallel case each process reads a part of the file. At the end all the processes have the corresponding mesh part.
Definition at line 1988 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2084 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2126 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2168 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2210 of file restart.F90.
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Definition at line 2252 of file restart.F90.
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Definition at line 2280 of file restart.F90.
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Definition at line 2308 of file restart.F90.
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Definition at line 2335 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2362 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2376 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2390 of file restart.F90.
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| [in] | root | which process is going to write the data |
Definition at line 2404 of file restart.F90.
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Definition at line 2418 of file restart.F90.
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Definition at line 2432 of file restart.F90.
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Definition at line 2446 of file restart.F90.
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Definition at line 2459 of file restart.F90.
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The data_types refer mainly to the run-mode of the calculation.
Definition at line 154 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_undefined = -1 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_all = 0 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_gs = 1 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_unocc = 2 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_td = 3 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_em_resp = 4 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_em_resp_fd = 5 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_kdotp = 6 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_vib_modes = 7 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_vdw = 8 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_casida = 9 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_oct = 10 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_partition = 11 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_proj = 12 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_iteration = 13 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_custom = 14 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_dm = 15 |
Definition at line 156 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_type_dump = 1 |
Definition at line 184 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_type_load = 2 |
Definition at line 184 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_states = 1 |
For each data type, we can write different information into the restart file, which are selected by the restart flags:
Definition at line 189 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_rho = 2 |
Definition at line 189 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_vhxc = 4 |
Definition at line 189 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_mix = 8 |
Definition at line 189 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_skip = 16 |
Definition at line 189 of file restart.F90.
| integer, parameter, public restart_oct_m::restart_flag_literal = 32 |
Definition at line 189 of file restart.F90.
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Definition at line 207 of file restart.F90.
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Information about the components for a given system.
These information build the template for constructing the actual restart paths for each object
Definition at line 298 of file restart.F90.