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Octopus
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Data Types | |
interface | submesh_add_to_mesh |
type | submesh_t |
A submesh is a type of mesh, used for the projectors in the pseudopotentials It contains points on a regular mesh confined to a sphere of a given radius. More... | |
interface | submesh_to_mesh_dotp |
Functions/Subroutines | |
recursive real(real64) function | f_n (dims) |
subroutine, public | submesh_init_box (this, space, mesh, box, center) |
This subroutine creates a submesh which has the same box of the one that the user passes. More... | |
subroutine, public | submesh_init (this, space, mesh, latt, center, rc) |
subroutine | submesh_reorder_points (this, space, xtmp, rtmp) |
subroutine, public | submesh_merge (this, space, mesh, sm1, sm2, shift) |
subroutine, public | submesh_shift_center (this, space, newcenter) |
subroutine, public | submesh_broadcast (this, space, mesh, center, radius, root, mpi_grp) |
logical function, public | submesh_compatible (this, radius, center, dx) |
subroutine, public | submesh_end (this) |
subroutine, public | submesh_get_inv (this, map_inv) |
logical function, public | submesh_overlap (sm1, sm2, space) |
subroutine, public | submesh_build_global (this, space) |
subroutine, public | submesh_end_global (this) |
subroutine | zzsubmesh_add_to_mesh (this, sphi, phi, factor) |
complex(real64) function | zzsubmesh_to_mesh_dotp (this, sphi, phi, reduce) |
subroutine, public | submesh_get_cube_dim (sm, space, db) |
finds the dimension of a box containing the submesh More... | |
subroutine, public | submesh_init_cube_map (sm, space) |
subroutine, public | submesh_end_cube_map (sm) |
subroutine, public | dzsubmesh_batch_add (this, ss, mm) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor. In this version of the routine, the submesh batch is real and the mesh batch is complex. More... | |
real(real64) function, public | dsm_integrate (mesh, sm, ff, reduce) |
real(real64) function, public | dsm_integrate_frommesh (mesh, sm, ff, reduce) |
subroutine | ddsubmesh_add_to_mesh (this, sphi, phi, factor) |
subroutine, public | dsubmesh_copy_from_mesh (this, phi, sphi, conjugate) |
real(real64) function, public | dsm_nrm2 (sm, ff, reduce) |
this function returns the the norm of a vector More... | |
real(real64) function | ddsubmesh_to_mesh_dotp (this, sphi, phi, reduce) |
subroutine, public | dsubmesh_batch_add_matrix (this, factor, ss, mm) |
The following functions takes a batch of functions defined in submesh (ss) and adds all of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array 'factor'. More... | |
subroutine, public | dsubmesh_batch_add (this, ss, mm) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor. More... | |
subroutine, public | dsubmesh_batch_dotp_matrix (this, mm, ss, dot, reduce) |
complex(real64) function, public | zsm_integrate (mesh, sm, ff, reduce) |
complex(real64) function, public | zsm_integrate_frommesh (mesh, sm, ff, reduce) |
subroutine | zdsubmesh_add_to_mesh (this, sphi, phi, factor) |
subroutine, public | zsubmesh_copy_from_mesh (this, phi, sphi, conjugate) |
real(real64) function, public | zsm_nrm2 (sm, ff, reduce) |
this function returns the the norm of a vector More... | |
complex(real64) function | zdsubmesh_to_mesh_dotp (this, sphi, phi, reduce) |
subroutine, public | zsubmesh_batch_add_matrix (this, factor, ss, mm) |
The following functions takes a batch of functions defined in submesh (ss) and adds all of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array 'factor'. More... | |
subroutine, public | zsubmesh_batch_add (this, ss, mm) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor. More... | |
subroutine, public | zsubmesh_batch_dotp_matrix (this, mm, ss, dot, reduce) |
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private |
Definition at line 212 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_init_box | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space, | ||
class(mesh_t), intent(in), target | mesh, | ||
class(box_t), intent(in), target | box, | ||
real(real64), dimension(:), intent(in) | center | ||
) |
This subroutine creates a submesh which has the same box of the one that the user passes.
[in] | box | Simulation box of the submesh. Must be contained in the box of the mesh! |
Definition at line 226 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_init | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space, | ||
class(mesh_t), intent(in), target | mesh, | ||
type(lattice_vectors_t), intent(in) | latt, | ||
real(real64), dimension(1:space%dim), intent(in) | center, | ||
real(real64), intent(in) | rc | ||
) |
Definition at line 279 of file submesh.F90.
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private |
Definition at line 438 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_merge | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space, | ||
class(mesh_t), intent(in), target | mesh, | ||
type(submesh_t), intent(in) | sm1, | ||
type(submesh_t), intent(in) | sm2, | ||
real(real64), dimension(:), intent(in), optional | shift | ||
) |
[in,out] | this | valgrind objects to intent(out) due to the initializations above |
[in] | shift | If present, shifts the center of sm2 |
Definition at line 564 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_shift_center | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space, | ||
real(real64), dimension(:), intent(in) | newcenter | ||
) |
Definition at line 630 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_broadcast | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space, | ||
type(mesh_t), intent(in), target | mesh, | ||
real(real64), dimension(1:space%dim), intent(in) | center, | ||
real(real64), intent(in) | radius, | ||
integer, intent(in) | root, | ||
type(mpi_grp_t), intent(in) | mpi_grp | ||
) |
Definition at line 657 of file submesh.F90.
logical function, public submesh_oct_m::submesh_compatible | ( | type(submesh_t), intent(in) | this, |
real(real64), intent(in) | radius, | ||
real(real64), dimension(:), intent(in) | center, | ||
real(real64), intent(in) | dx | ||
) |
At the moment the center check doesnt matter because everywhere submeshes are recycled at the moment, between uses, the position doesnt change
Definition at line 717 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_end | ( | type(submesh_t), intent(inout) | this | ) |
Definition at line 735 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_get_inv | ( | type(submesh_t), intent(in) | this, |
integer, dimension(:), intent(out) | map_inv | ||
) |
Definition at line 759 of file submesh.F90.
logical function, public submesh_oct_m::submesh_overlap | ( | type(submesh_t), intent(in) | sm1, |
type(submesh_t), intent(in) | sm2, | ||
class(space_t), intent(in) | space | ||
) |
Definition at line 776 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_build_global | ( | type(submesh_t), intent(inout) | this, |
class(space_t), intent(in) | space | ||
) |
Definition at line 819 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_end_global | ( | type(submesh_t), intent(inout) | this | ) |
Definition at line 870 of file submesh.F90.
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private |
Definition at line 885 of file submesh.F90.
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private |
Definition at line 928 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_get_cube_dim | ( | type(submesh_t), intent(in), target | sm, |
class(space_t), intent(in) | space, | ||
integer, dimension(1:space%dim), intent(out) | db | ||
) |
finds the dimension of a box containing the submesh
Definition at line 971 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_init_cube_map | ( | type(submesh_t), intent(inout), target | sm, |
class(space_t), intent(in) | space | ||
) |
Definition at line 1006 of file submesh.F90.
subroutine, public submesh_oct_m::submesh_end_cube_map | ( | type(submesh_t), intent(inout) | sm | ) |
Definition at line 1045 of file submesh.F90.
subroutine, public submesh_oct_m::dzsubmesh_batch_add | ( | type(submesh_t), intent(in) | this, |
class(batch_t), intent(in) | ss, | ||
class(batch_t), intent(inout) | mm | ||
) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor. In this version of the routine, the submesh batch is real and the mesh batch is complex.
Definition at line 1061 of file submesh.F90.
real(real64) function, public submesh_oct_m::dsm_integrate | ( | class(mesh_t), intent(in) | mesh, |
type(submesh_t), intent(in) | sm, | ||
real(real64), dimension(:), intent(in), optional | ff, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 1165 of file submesh.F90.
real(real64) function, public submesh_oct_m::dsm_integrate_frommesh | ( | type(mesh_t), intent(in) | mesh, |
type(submesh_t), intent(in) | sm, | ||
real(real64), dimension(:), intent(in), optional | ff, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 1205 of file submesh.F90.
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private |
Definition at line 1238 of file submesh.F90.
subroutine, public submesh_oct_m::dsubmesh_copy_from_mesh | ( | type(submesh_t), intent(in) | this, |
real(real64), dimension(:), intent(in) | phi, | ||
real(real64), dimension(:), intent(inout) | sphi, | ||
logical, intent(in), optional | conjugate | ||
) |
Definition at line 1286 of file submesh.F90.
real(real64) function, public submesh_oct_m::dsm_nrm2 | ( | type(submesh_t), intent(in) | sm, |
real(real64), dimension(:), intent(in) | ff, | ||
logical, intent(in), optional | reduce | ||
) |
this function returns the the norm of a vector
Definition at line 1316 of file submesh.F90.
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private |
Definition at line 1353 of file submesh.F90.
subroutine, public submesh_oct_m::dsubmesh_batch_add_matrix | ( | type(submesh_t), intent(in) | this, |
real(real64), dimension(:, :), intent(in) | factor, | ||
class(batch_t), intent(in) | ss, | ||
class(batch_t), intent(inout) | mm | ||
) |
The following functions takes a batch of functions defined in submesh (ss) and adds all of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array 'factor'.
Definition at line 1398 of file submesh.F90.
subroutine, public submesh_oct_m::dsubmesh_batch_add | ( | type(submesh_t), intent(in) | this, |
class(batch_t), intent(in) | ss, | ||
class(batch_t), intent(inout) | mm | ||
) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor.
Definition at line 1491 of file submesh.F90.
subroutine, public submesh_oct_m::dsubmesh_batch_dotp_matrix | ( | type(submesh_t), intent(in) | this, |
class(batch_t), intent(in) | mm, | ||
class(batch_t), intent(in) | ss, | ||
real(real64), dimension(:, :), intent(inout), contiguous | dot, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 1543 of file submesh.F90.
complex(real64) function, public submesh_oct_m::zsm_integrate | ( | class(mesh_t), intent(in) | mesh, |
type(submesh_t), intent(in) | sm, | ||
complex(real64), dimension(:), intent(in), optional | ff, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 1702 of file submesh.F90.
complex(real64) function, public submesh_oct_m::zsm_integrate_frommesh | ( | type(mesh_t), intent(in) | mesh, |
type(submesh_t), intent(in) | sm, | ||
complex(real64), dimension(:), intent(in), optional | ff, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 1742 of file submesh.F90.
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private |
Definition at line 1775 of file submesh.F90.
subroutine, public submesh_oct_m::zsubmesh_copy_from_mesh | ( | type(submesh_t), intent(in) | this, |
complex(real64), dimension(:), intent(in) | phi, | ||
complex(real64), dimension(:), intent(inout) | sphi, | ||
logical, intent(in), optional | conjugate | ||
) |
Definition at line 1823 of file submesh.F90.
real(real64) function, public submesh_oct_m::zsm_nrm2 | ( | type(submesh_t), intent(in) | sm, |
complex(real64), dimension(:), intent(in) | ff, | ||
logical, intent(in), optional | reduce | ||
) |
this function returns the the norm of a vector
Definition at line 1853 of file submesh.F90.
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private |
Definition at line 1890 of file submesh.F90.
subroutine, public submesh_oct_m::zsubmesh_batch_add_matrix | ( | type(submesh_t), intent(in) | this, |
complex(real64), dimension(:, :), intent(in) | factor, | ||
class(batch_t), intent(in) | ss, | ||
class(batch_t), intent(inout) | mm | ||
) |
The following functions takes a batch of functions defined in submesh (ss) and adds all of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array 'factor'.
Definition at line 1935 of file submesh.F90.
subroutine, public submesh_oct_m::zsubmesh_batch_add | ( | type(submesh_t), intent(in) | this, |
class(batch_t), intent(in) | ss, | ||
class(batch_t), intent(inout) | mm | ||
) |
The following function takes a batch of functions defined in submesh (ss) and adds one of them to each of the mesh functions in other batch (mm). Each one is multiplied by a factor given by the array factor.
Definition at line 2028 of file submesh.F90.
subroutine, public submesh_oct_m::zsubmesh_batch_dotp_matrix | ( | type(submesh_t), intent(in) | this, |
class(batch_t), intent(in) | mm, | ||
class(batch_t), intent(in) | ss, | ||
complex(real64), dimension(:, :), intent(inout), contiguous | dot, | ||
logical, intent(in), optional | reduce | ||
) |
Definition at line 2080 of file submesh.F90.