This module implements the abstract system type. More...

Detailed Description

This module implements the abstract system type.

Data Types
type	barrier_t

interface	system_do_algorithmic_operation
	Execute one operation that is part of a larger algorithm. Returns true if the operation was successfully executed, false otherwise. More...

interface	system_init_interaction
	initialize a given interaction of the system More...

interface	system_initialize
	set initial conditions for a system More...

interface	system_is_tolerance_reached
	check whether a system has reached a given tolerance More...

type	system_iterator_t

type	system_list_t
	These classes extends the list and list iterator to create a system list. More...

interface	system_restart_read_data

interface	system_restart_write_data

interface	system_store_current_status
	For some algorithms it might be necessary to store the status of a system at a given algorithmic step. More...

type	system_t
	Abstract class for systems. More...

interface	system_update_kinetic_energy

Functions/Subroutines
subroutine, public	system_execute_algorithm (this)
	perform one or more algorithmic operations More...

subroutine, public	system_reset_iteration_counters (this, accumulated_iterations)

recursive subroutine, public	system_create_interactions (this, interaction_factory, available_partners)
	create the interactions of the system More...

logical function	system_update_couplings (this)
	Update the couplings (quantities) of the interaction partners. More...

subroutine	system_update_interactions (this)
	Attempt to update all interactions of the system. More...

subroutine	system_update_interactions_start (this)

subroutine	system_update_interactions_finish (this)

subroutine, public	system_restart_write (this)

logical function, public	system_restart_read (this)

subroutine	system_output_start (this)

subroutine	system_output_write (this)

subroutine	system_output_finish (this)

subroutine, public	system_new_algorithm (this, factory)

recursive logical function	system_algorithm_finished (this)

subroutine, public	system_init_iteration_counters (this)
	Initialize the iteration counters of the system and its interactions, algorithms and quantities. More...

subroutine, public	system_algorithm_start (this)

subroutine, public	system_algorithm_finish (this)

subroutine	system_iteration_info (this)

logical function	system_process_is_slave (this)

subroutine, public	system_end (this)

subroutine	system_list_add_node (this, partner)
	add system to list More...

recursive logical function	system_list_contains (this, partner)

class(system_t) function, pointer	system_iterator_get_next (this)

subroutine, public	system_init_parallelization (this, grp)
	Basic functionality: copy the MPI group. This function needs to be implemented by extended types that need more initialization for their parallelization. More...

subroutine	system_start_barrier (this, target_time, barrier_index)

subroutine	system_end_barrier (this, barrier_index)

logical function	system_arrived_at_barrier (this, barrier_index)

logical function	system_arrived_at_any_barrier (this)

subroutine, public	system_update_potential_energy (this)
	Calculate the potential energy of the system. The potential energy is defined as the sum of all energies arising from interactions with external systems. (Note that multisystems override this function) More...

subroutine	system_update_internal_energy (this)
	Calculate the internal energy of the system. The internal energy is defined as the sum of all energies arising from intra-interactions and the entropy terms (if available). (Note that multisystems override this function) More...

subroutine, public	system_update_total_energy (this)
	Calculate the total energy of the system. The total energy is defined as the sum of the kinetic, the internal and the potential energies. More...

Variables
integer, parameter, public	number_barriers = 1

integer, parameter, public	barrier_restart = 1

Function/Subroutine Documentation

◆ system_execute_algorithm()

subroutine, public system_oct_m::system_execute_algorithm ( class(system_t), intent(inout) this )

perform one or more algorithmic operations

The following subroutine takes a system and performs as many algorithmic operations as possible on the system until a barrier is reached. There are two types of barriers:

explicit barriers, implemented using the barrier_t type
the couplings update

The couplings update is always considered a barrier, even if the update was successful. This is to allow other system to also update their couplings with this system before it moves on to the next operations.

Definition at line 338 of file system.F90.

◆ system_reset_iteration_counters()

subroutine, public system_oct_m::system_reset_iteration_counters	(	class(system_t), intent(inout)	this,
		integer, intent(in)	accumulated_iterations
	)

Definition at line 464 of file system.F90.

◆ system_create_interactions()

recursive subroutine, public system_oct_m::system_create_interactions	(	class(system_t), intent(inout)	this,
		class(interactions_factory_abst_t), intent(in)	interaction_factory,
		class(partner_list_t), intent(in), target	available_partners
	)

create the interactions of the system

Given a list of available partners, this routine creates all the supported interactions between the system and the partners. To do so, it uses an interaction factory. It also initializes all the interactions (calling system_t::init_interaction() and interaction_partner_t::init_interaction_as_partner())

Note: This routine also creates the ghost interactions between the system and all available partners. Any class overriding this method must make sure ghost interactions are properly created or the framework might not work correctly.

Parameters

[in,out]	this	system for which interactions are created.
[in]	interaction_factory	factory that creates the actual interactions
[in]	available_partners	a (hierarchical) list of available partners

Definition at line 518 of file system.F90.

◆ system_update_couplings()

logical function system_oct_m::system_update_couplings ( class(system_t), intent(inout) this )

private

Update the couplings (quantities) of the interaction partners.

This function loops over all interactions and the corresponding interaction partners and attempts to update their couplings to the requested iteration. It returns true if all couplings have been successfully updated.

Definition at line 695 of file system.F90.

◆ system_update_interactions()

subroutine system_oct_m::system_update_interactions ( class(system_t), intent(inout) this )

private

Attempt to update all interactions of the system.

First we try to update the systems own quantities required for the interaction, and then try to update the interaction itself.

Definition at line 732 of file system.F90.

◆ system_update_interactions_start()

subroutine system_oct_m::system_update_interactions_start ( class(system_t), intent(inout) this )

private

Definition at line 801 of file system.F90.

◆ system_update_interactions_finish()

subroutine system_oct_m::system_update_interactions_finish ( class(system_t), intent(inout) this )

private

Definition at line 813 of file system.F90.

◆ system_restart_write()

subroutine, public system_oct_m::system_restart_write ( class(system_t), intent(inout) this )

Definition at line 825 of file system.F90.

◆ system_restart_read()

logical function, public system_oct_m::system_restart_read ( class(system_t), intent(inout) this )

Definition at line 866 of file system.F90.

◆ system_output_start()

subroutine system_oct_m::system_output_start ( class(system_t), intent(inout) this )

private

Definition at line 911 of file system.F90.

◆ system_output_write()

subroutine system_oct_m::system_output_write ( class(system_t), intent(inout) this )

private

Definition at line 923 of file system.F90.

◆ system_output_finish()

subroutine system_oct_m::system_output_finish ( class(system_t), intent(inout) this )

private

Definition at line 935 of file system.F90.

◆ system_new_algorithm()

subroutine, public system_oct_m::system_new_algorithm	(	class(system_t), intent(inout)	this,
		class(algorithm_factory_t), intent(in)	factory
	)

Definition at line 947 of file system.F90.

◆ system_algorithm_finished()

recursive logical function system_oct_m::system_algorithm_finished ( class(system_t), intent(in) this )

private

Definition at line 970 of file system.F90.

◆ system_init_iteration_counters()

subroutine, public system_oct_m::system_init_iteration_counters ( class(system_t), intent(inout) this )

Initialize the iteration counters of the system and its interactions, algorithms and quantities.

Note that th iteration counters for interactions, and on-demand quantities are initialized to one iteration before the algorithm iteration counter. This is necessary, as the interactions and on-demand quantities first need to be updated.

Definition at line 985 of file system.F90.

◆ system_algorithm_start()

subroutine, public system_oct_m::system_algorithm_start ( class(system_t), intent(inout) this )

Definition at line 1022 of file system.F90.

◆ system_algorithm_finish()

subroutine, public system_oct_m::system_algorithm_finish ( class(system_t), intent(inout) this )

Definition at line 1074 of file system.F90.

◆ system_iteration_info()

subroutine system_oct_m::system_iteration_info ( class(system_t), intent(in) this )

private

Definition at line 1110 of file system.F90.

◆ system_process_is_slave()

logical function system_oct_m::system_process_is_slave ( class(system_t), intent(in) this )

private

Definition at line 1139 of file system.F90.

◆ system_end()

subroutine, public system_oct_m::system_end ( class(system_t), intent(inout) this )

Definition at line 1151 of file system.F90.

◆ system_list_add_node()

subroutine system_oct_m::system_list_add_node	(	class(system_list_t)	this,
		class(interaction_partner_t), target	partner
	)

private

add system to list

Definition at line 1177 of file system.F90.

◆ system_list_contains()

recursive logical function system_oct_m::system_list_contains	(	class(system_list_t)	this,
		class(interaction_partner_t), target	partner
	)

private

Definition at line 1194 of file system.F90.

◆ system_iterator_get_next()

class(system_t) function, pointer system_oct_m::system_iterator_get_next ( class(system_iterator_t), intent(inout) this )

private

Definition at line 1222 of file system.F90.

◆ system_init_parallelization()

subroutine, public system_oct_m::system_init_parallelization	(	class(system_t), intent(inout)	this,
		type(mpi_grp_t), intent(in)	grp
	)

Basic functionality: copy the MPI group. This function needs to be implemented by extended types that need more initialization for their parallelization.

Definition at line 1242 of file system.F90.

◆ system_start_barrier()

subroutine system_oct_m::system_start_barrier	(	class(system_t), intent(inout)	this,
		real(real64), intent(in)	target_time,
		integer, intent(in)	barrier_index
	)

private

Definition at line 1257 of file system.F90.

◆ system_end_barrier()

subroutine system_oct_m::system_end_barrier	(	class(system_t), intent(inout)	this,
		integer, intent(in)	barrier_index
	)

private

Definition at line 1271 of file system.F90.

◆ system_arrived_at_barrier()

logical function system_oct_m::system_arrived_at_barrier	(	class(system_t), intent(inout)	this,
		integer, intent(in)	barrier_index
	)

private

Definition at line 1284 of file system.F90.

◆ system_arrived_at_any_barrier()

logical function system_oct_m::system_arrived_at_any_barrier ( class(system_t), intent(inout) this )

private

Definition at line 1304 of file system.F90.

◆ system_update_potential_energy()

subroutine, public system_oct_m::system_update_potential_energy ( class(system_t), intent(inout) this )

Calculate the potential energy of the system. The potential energy is defined as the sum of all energies arising from interactions with external systems. (Note that multisystems override this function)

Definition at line 1326 of file system.F90.

◆ system_update_internal_energy()

subroutine system_oct_m::system_update_internal_energy ( class(system_t), intent(inout) this )

private

Calculate the internal energy of the system. The internal energy is defined as the sum of all energies arising from intra-interactions and the entropy terms (if available). (Note that multisystems override this function)

Definition at line 1353 of file system.F90.

◆ system_update_total_energy()

subroutine, public system_oct_m::system_update_total_energy ( class(system_t), intent(inout) this )

Calculate the total energy of the system. The total energy is defined as the sum of the kinetic, the internal and the potential energies.

External energy as the sum over interaction energies

Self energy arises from the interaction with itself

Definition at line 1378 of file system.F90.

Variable Documentation

◆ number_barriers

integer, parameter, public system_oct_m::number_barriers = 1

Definition at line 168 of file system.F90.

◆ barrier_restart

integer, parameter, public system_oct_m::barrier_restart = 1

Definition at line 168 of file system.F90.

Detailed Description

Data Types

Functions/Subroutines

Variables

Function/Subroutine Documentation

◆ system_execute_algorithm()

◆ system_reset_iteration_counters()

◆ system_create_interactions()

◆ system_update_couplings()

◆ system_update_interactions()

◆ system_update_interactions_start()

◆ system_update_interactions_finish()

◆ system_restart_write()

◆ system_restart_read()

◆ system_output_start()

◆ system_output_write()

◆ system_output_finish()

◆ system_new_algorithm()

◆ system_algorithm_finished()

◆ system_init_iteration_counters()

◆ system_algorithm_start()

◆ system_algorithm_finish()

◆ system_iteration_info()

◆ system_process_is_slave()

◆ system_end()

◆ system_list_add_node()

◆ system_list_contains()

◆ system_iterator_get_next()

◆ system_init_parallelization()

◆ system_start_barrier()

◆ system_end_barrier()

◆ system_arrived_at_barrier()

◆ system_arrived_at_any_barrier()

◆ system_update_potential_energy()

◆ system_update_internal_energy()

◆ system_update_total_energy()

Variable Documentation

◆ number_barriers

◆ barrier_restart